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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015864705.1_cds_XP_016516070.1_28349
CDS Infomation

[gene=LOC107832722] [db_xref=GeneID:107832722] [protein=cyprosin-like] [protein_id=XP_016516070.1] [location=join(41681..42019,42096..42156,42258..42352,42425..42537,42668..42836,42915..42954,43036..43100,43175..43288,43385..43449,43538..43661,43751..43867,43969..44054,44126..44210)] [gbkey=CDS]
Sequence

ATGGAGATGAAAAATCTTGTTGCATCAGTTGTAATATGGATATGGTATATAACCTGTGGT
TTCGGCTTCAATGTATATGCTGATGATATGGTTAGGATTGAGCTAAAAAGGCGACCCTTG
GACCTTTCTAGTATAAGGGATGCAACAATGTACGCTAAAGATCTCAATAGAAAATTGGGT
AATTCTGATCTGAATGACCAGATAATTTACCTAAAAAGTTATCGTGATGTCCACTACTTT
GCGGAGATTGGTATTGGTTCACCGCCCCAACGATTCATTGTTGTGTTTGATACTGCAAGT
TCCTATCTTTGGGTCCCTTCTTCAAGATGCTTTTTCTCGATTGCATGTTATCTTCGTCCC
AGGTACAAATCAAGACTATCAAATACGTATACAAAAATTGGAAAGTCTTGCAAAATCCCT
TTTGGCACTGGTTCAGTGCATGGATTCTTCAGCCAAGACAATTTGAAAGTTGGAGATGCT
ATCTTAAAGCAGCAGGTTTTCACTGAGGTAACACGGGAGGGATACTTCACATTCTTGCGT
GCACGATTTGATGGAGTACTAGGGCTTGGATTTCAGGACACGGCTTCAAGGAATGTCACA
CCAGTATGGTATAACATGTTGCTTCAGCATATGGTTACCAAGTCAATCTTCTCATTCTGG
CTAAATCGAGATCCTACGTCTAGGATAGCGGGTGAAATTCTCTTTGGAGGCATGGATTGG
ACTCACTTCAGGGGTCAGCATACATACGTACCAGTTGCTCAAAATGGTTATTGGGAGATT
GAGATAGGGGATCTTTTTATAGGAAACAATTCAACAGGTCTTTGTAAGGATGGATGTCAA
GCTATTGTGGATACTGGAACATCTTTTATTGCTGGTCCAACTACTATTTTAACTCAAATA
AATCATGCCATCGGAGCTGAAGGAATTGTTAGTTTGGAATGCAAAAAAGTTGTCTCAAAT
TATGGGGATTCGATCTGGGAACGCTTGATATCAGGGATACAACCGGAGAAGATTTGCAAC
AGAATTGGACTCTGTACAAATAATGGATCTTTAGGTGGAAGTCATGAACACCGAATGGGA
ATTCGAGGTGGTTTATGTTCTTCTTGTGAGATGATAGTGTTCTGGATACAAGTAGAGATT
AGAAAAGAGAGATCAAAAGAAAAAGCTTTTCAATATGCCAATCAGCTGTGTGAGACGCTT
CCGAATCCTGGGGGAAAGTCATTTATCAACTGTGATGTCTTTGCCCTGCCACATATAACA
TTTACCATTGGGAAAAAATCTTTTCCCCTTTCTCCAGATCAGTATGTTATCAGAGTTGAT
GACAGTCAAGGTGTCCACTGTATTAGTGGATTTACAACTTTAAACGTGCATCCGCGACGT
CCCCTCTGGGTTCTTGGAGATGCATTCTTGAGAGCATATCACACAGTTTTCGACTTTGGC
AATTCACAAATTGGATTTGCAGAAAGTGCTTAG

Peptide Sequence

PEP ID

XP_016516070.1
PEP Infomation

PREDICTED: cyprosin-like [Nicotiana tabacum]
Sequence

MEMKNLVASVVIWIWYITCGFGFNVYADDMVRIELKRRPLDLSSIRDATMYAKDLNRKLG
NSDLNDQIIYLKSYRDVHYFAEIGIGSPPQRFIVVFDTASSYLWVPSSRCFFSIACYLRP
RYKSRLSNTYTKIGKSCKIPFGTGSVHGFFSQDNLKVGDAILKQQVFTEVTREGYFTFLR
ARFDGVLGLGFQDTASRNVTPVWYNMLLQHMVTKSIFSFWLNRDPTSRIAGEILFGGMDW
THFRGQHTYVPVAQNGYWEIEIGDLFIGNNSTGLCKDGCQAIVDTGTSFIAGPTTILTQI
NHAIGAEGIVSLECKKVVSNYGDSIWERLISGIQPEKICNRIGLCTNNGSLGGSHEHRMG
IRGGLCSSCEMIVFWIQVEIRKERSKEKAFQYANQLCETLPNPGGKSFINCDVFALPHIT
FTIGKKSFPLSPDQYVIRVDDSQGVHCISGFTTLNVHPRRPLWVLGDAFLRAYHTVFDFG
NSQIGFAESA

Transcript Sequence

Gene sequence data has not been registered.